CDS

Accession Number TCMCG006C47583
gbkey CDS
Protein Id XP_013735075.1
Location complement(join(18155912..18156094,18156218..18156347,18156526..18156632,18156718..18156811,18156907..18157103,18157338..18157409,18157508..18157622,18157900..18158016,18158107..18158198,18158286..18158462,18158565..18158639,18158786..18158926,18159186..18159374,18159624..18159689,18159793..18159943,18160137..18160205,18160346..18160494,18160577..18160708,18160810..18161135,18161244..18161280,18161423..18161477,18161585..18161646,18161753..18161773,18162087..18162089))
Gene LOC106438461
GeneID 106438461
Organism Brassica napus

Protein

Length 919aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013879621.2
Definition coatomer subunit beta'-3 isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category U
Description The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K17302        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030126        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030137        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030663        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGCTCAGACTCGATATCAAGAAAAAATTTGCTCAACGATCAGAGCGAGTGAAATCTGTGGATCTGCATCCTACAGAGCCATGGATTCTAGCGAGTTTGTATTCTGGAACCGTCTGTATCTGGAACTACCAGACTCAGACGATAACAAAATCTTTCGAGGTCACCGAATTGCCAGTTAGGTCGGCCAAGTTTATCCCACGCAAGCAATGGGTTGTGGCAGGAGCGGATGATATGTACATCCGTGTATACAACTACAACACAATGGACAAGGTTAAAGTGTTTGAGGCTCATTCCGATTACATTAGGTGTGTTGCTGTCCATCCGACCCTCCCATATGTGCTGTCATCTTCTGATGATATGCTCATAAAGCTCTGGGACTGGGAAAATGGTTGGGCCTGTACTCAGATCTTTGAGGGACATTCTCACTATGTGATGCAAGTGGTATTTAATCCAAAAGACACCAACACTTTTGCCAGTGCATCGCTTGACCGTTCCATAAAGATATGGAATCTTGGCTCCCCAGACCCAAATTTTACACTGGATGCTCATCAGAAAGGAGTCAACTGCGTAGATTATTTCACAGGGGGTGATAAGCCCTATTTAATTACTGGCTCTGATGATCATACTGCTAAGGTATGGGACTATCAAACTAAAAGCTGTGTCCAGACGCTAGAAGGGCACACCCACAATGTATCTGCAGTATGTTTCCATCCGGAGCTTCCAATAATACTCACAGGCTCTGAGGATGGCACTGTTCGCATTTGGCACGCCACGACTTACAGGCTAGAGAACACATTGAATTATGCTCTCGAGAGAGTCTGGGCCATTGGTTACATAAAAAGTTCGCGCAGGGTTGTGATTGGATACGATGAAGGAACCATCATGGTTAAACTTGGACGAGAAATTCCTGTCGCTAGCATGGACAGTAGCGGAAAAATTATATGGGCTAAGCATAATGAAATCCAAACTGCAAACATCAAAAGTATTGGTGCCAGTTACGAGGTTACTGATGGAGAAAGACTTCCCTTGGCTGTTAAAGATCTGGGGACCTGTGATCTTTATCCACAAAGCTTGAAGCATAACCCAAACGGGAGGTTTGTCGTAGTCTGCGGGGATGGGGAGTACATAATCTACACAGCTTTGGCTTGGAGAAATAGGTCTTTCGGTTCTGGACTGGAATTTGTTTGGTCATCCGAGGGGGAATGTGCAGTTCGAGAGAGCTCGTCAAAGATAAAGATATTCAATAAAAATTTCCAGGAAAGGAAGAGTATTCGGCCTACTTTCTCAGCTGAGAAGATTTTTGGAGGATCCTTGTTAGCAATGTGTTCAAGTGATTTCATCTGCTTTTATGATTGGGCTGAATGTAGGCTGATTCAGCGAATTGATGTCACAGTAAAGAATCTTTATTGGGCAGAAAGTGGTGATTTAGTTGCCATTGCTAGTGATACGTCATTCTACATCCTGAAGTTCAATCGTGACTTGGTTTCCTCCCATTTTGCTAGTGGAAGACAAACTGATGAAGAAGGTGTTGAGGATGCTTTTGAGGTTCTCCATGAGAATGATGAACGTGTTAGGACAGGTATATGGGTCGGGGACTGCTTCATTTACAACAACTCTTCTTCGAAGCTTAACTATTGTGTTGGAGGCGAGGTAACCACAATGTATCATTTGGACCGTCCAATGTATTTGTTAGGCTATATTGCCAACCAAAGTCGGGTCTACTTGGTAGACAAAGAATTCAATGTCATAGGATATACCCTGCTGCTTAGCCTGATTGAATACAAGACTCTTGTGATGCGAGGTGATTTGGACAAAGCCAATGAAATTTTACCTACAATTCCTAAAGAGCAGCATAACAATGTTGCTCATTTCTTGGAGTCTCGGGGAATGATTGAAGATGCTTTAGAAATTGCGACCGATCCTGACTACAGATTTGAGCTGGCCATACAATTGGGTAGACTTGAAATTGCCAAGGAAATCGCTGAAGAAGTGCAGAGTGAGTCTAAATGGAAGCAGTTGGGAGAGTTAGCCATGTCTTCTGGCAAGCTCCAACTGGCCGAGGATTGCATGAAGTACGCTACGGATTTGAGTGGTTTGCTACTACTATATTCTTCTTTGGGAGATGCTGAAGGGATGTCAAAGCTTGCATCCCTTGCTAAGGAGCAGGGAAAGAACAATGTCGCCTTTCTTTGCTTATTCATGCTGGGTAGATTGGAAGATTGTCTGCAGTTATTGGTGGAGAGCAACCGGATACCAGAAGCTGCTCTGATGGCACGTTCTTATCTTCCAAGCAAAGTTTCAGAGATAGTAGCCCTCTGGAGAAAAGATCTAAGCAAGGTTAATTCGAAAGCAGCAGAATCTTTGGCTGATCCTGAAGAGTACCCAAATCTTTTTGAGGATTGGCAAGTTGCTCGTTCTGTTGAAGCTAATGCTGTAGAGGCGAGGGGAGTTTATTCTGCTGCAGAAAATTATGCAACCCAGGCCGATCAACCTTTCATTACCCTCGTGGAAGCCTTCAGAAACCTGCAAGTTGAAGCAGAGGAACCACTTGAAAATGGAGACGGAGATCACGAGGTAGCAGAAGAAAATGGTGATGCAGAGAATGAAGGAGGTGAAGAGGAAGAGAATGAAGAAGAAGTGAATCAAGAAGAGGGAGTTGTTGATGAAGATTCTACAGATGGTAGTGCTGTACTTGTTAATAGAAGTGAGGGTGAGGAAGAGTGGGGTACGAATAGTAAAGACAACCAATCAGCCTAA
Protein:  
MPLRLDIKKKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRSIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIILTGSEDGTVRIWHATTYRLENTLNYALERVWAIGYIKSSRRVVIGYDEGTIMVKLGREIPVASMDSSGKIIWAKHNEIQTANIKSIGASYEVTDGERLPLAVKDLGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFNKNFQERKSIRPTFSAEKIFGGSLLAMCSSDFICFYDWAECRLIQRIDVTVKNLYWAESGDLVAIASDTSFYILKFNRDLVSSHFASGRQTDEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNSSSKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVMRGDLDKANEILPTIPKEQHNNVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAKEIAEEVQSESKWKQLGELAMSSGKLQLAEDCMKYATDLSGLLLLYSSLGDAEGMSKLASLAKEQGKNNVAFLCLFMLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSKVNSKAAESLADPEEYPNLFEDWQVARSVEANAVEARGVYSAAENYATQADQPFITLVEAFRNLQVEAEEPLENGDGDHEVAEENGDAENEGGEEEENEEEVNQEEGVVDEDSTDGSAVLVNRSEGEEEWGTNSKDNQSA